I have also seen this kind of damage from reversed polarity and then indeed the TC is also toast. Even if the 5v holds up parts usually fry two ways, either the chip becomes solid metal internally and conducts fully or it breaks contact internally and then all applied voltages will seem OK.
After I am back from my business trip I can acces my files of the AMP11 again and investigate further what exactly could have caused this to happen. The piece of metal debris was just a hunch, but I definitely would not exclude the possibility yet. As you already mention the chip is very well protected and when things blow like that it is most often caused by something really unusual or unexpected happening externally...
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Pics can help a lot to diagnose something from any place on the globe...